Objectives
- Understand and implement the principles of reproducible science in analysis and development projects
- Manipulate basic commands of reproducibility tools
Course Content
- Introduction to reproducibility
- Best practices on code history and sharing: Git
- Software environment : conda/mamba
- Introduction to workflows using Snakemake and Nextflow
Prerequisites
- Familiarity with basic Linux commands or have completed the training course “Introduction to the command-line interface.”
- Have an account on the GLiCID cluster (For new requests)
Duration
- 1 day / 7 hours
Fees
- Academics Nantes Université: 236 euros
- Others academics: 272 euros
- Private sector: 652 euros
Instructors
- Bioinformatics engineers from BiRD
Validation
Certificate of attendance provided to each participant on request
Registration
Register Here (except for PhD students - via Amethis)
